CDS

Accession Number TCMCG016C12018
gbkey CDS
Protein Id OMO80633.1
Location join(4029..4110,4655..4806,5002..5085,5196..5360,5455..5594,6334..6695,7285..7400,7490..7534,7642..7715,7828..7877,8437..8537)
Organism Corchorus capsularis
locus_tag CCACVL1_12833

Protein

Length 456aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010283.1
Definition Zinc finger, RING-type [Corchorus capsularis]
Locus_tag CCACVL1_12833

EGGNOG-MAPPER Annotation

COG_category J
Description Endoribonuclease L-PSP
KEGG_TC -
KEGG_Module -
KEGG_Reaction R11098        [VIEW IN KEGG]
R11099        [VIEW IN KEGG]
KEGG_rclass RC03275        [VIEW IN KEGG]
RC03354        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09022        [VIEW IN KEGG]
EC 3.5.99.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009081        [VIEW IN EMBL-EBI]
GO:0009082        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019239        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAGATCTTGGAATTGGCTTCTTAATTACAGTCTTGAAGAGAACTGTTTTTGCTGCTTTCACCTGCATTTTTGCAATAGGAGGGGCTATAGTGGGAACTATTGCCGGAGCAATGAAAGGGCAGACAACAGAAACTGGGTTTTTCCGGGGAGCTGGAATTGGCTCTGTTGCAGGTGCCATTACTGCAGTTCAATTGCTGGAATCATTAGCTGATGGGGAGTCATTGTCTAAGGTAGCTTTATTAGTTAGCTTATTAAATGGGAAGGTCTTCATCGAATGGGTAAGTCCAGCAGTGCTAAAGGCTTATCAATGGCAAATGAACTCACTCGAATCCACATACAGAGAAATCTCAGATATATATGATATAAATGGAGAAAAGGGTTTGTCTAGAAGTTGCATTGAGAAGCTTCCAGTGCATGAATTTCACTCTAATAAGCTGACAAGATCAAAGGAGGAATCTTCTTGTTCAATTTGCCTACAGGAGCTAAAGGATGGAGAATTGGCAAGAAATCTTCCAAGATGTGGGCACATCTTCCACATAAAGTGCATAGATGAATGGCTCAACAGGCAAGGAACTTGCCCAATGTGTAGAGAACATGTTTGCAATGATGCTGAGCAAGTTTTTGGGCTTCACCAACCAAAGGGCAATCTAGTAAACATCGAAAGACAACAGAGGAATATTCCCAGTTACCTTACCATTAATTCAGTTTACAAATTCCCAGTTCAGTTCTGTTCACTTCACCACTTCACCAACACAACAAAAAAACATAAGGCCGAAGACAAGGAAAGTAACAGCGAGACAAAGGGAGAGATGGCTTGGTGTAGTCTAAGGTCTCTCAATGTTCCAACCATCGATGCCGGCGTGTTACGCACGCGCTCTCCATTGGCCGCTGTCGGAGGAGTTGTAGCTGGCTCTTCCCTTTGGCGATCTTCCTCCAGAAAAGGCTTTCCTTTGGCTTGCTTAAGCCTCTCCACTGCCCCTGGGATAAAGGAGGCTGTGGCAACTGACAAAGCTCCAGCAGCTTTGGGACCATATTCTCAGGCCATCAAGGCCAATAACCTTCTCTTTGTCTCAGGTGTTCTTGGTCTTATTCCAGAGACTGGCAAGTTTGTTTCAGATAGTGTAGAGGATCAAACAGAACAGGTACTTAAAAACATGGGAGAAATACTGAAAGCTAGTGGAGCTGACTATTCCTCTGTGGTTAAGACAACAATTATGCTGGCTGACTTGAAAGACTTCAAGAAAGTAAACGAGATCTATGCTAAATACTTCCCTTCACCTGCTCCAGCTCGTTCGACATATCAGGTAGCAGCATTGCCGTTGGATGCCAAGATTGAAATTGAATGCATTGCTACACTCAAGGCATGA
Protein:  
MRDLGIGFLITVLKRTVFAAFTCIFAIGGAIVGTIAGAMKGQTTETGFFRGAGIGSVAGAITAVQLLESLADGESLSKVALLVSLLNGKVFIEWVSPAVLKAYQWQMNSLESTYREISDIYDINGEKGLSRSCIEKLPVHEFHSNKLTRSKEESSCSICLQELKDGELARNLPRCGHIFHIKCIDEWLNRQGTCPMCREHVCNDAEQVFGLHQPKGNLVNIERQQRNIPSYLTINSVYKFPVQFCSLHHFTNTTKKHKAEDKESNSETKGEMAWCSLRSLNVPTIDAGVLRTRSPLAAVGGVVAGSSLWRSSSRKGFPLACLSLSTAPGIKEAVATDKAPAALGPYSQAIKANNLLFVSGVLGLIPETGKFVSDSVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIEIECIATLKA